Cohort Summary Statistics
Overview of variant statistics and quality metrics for your annotated cohort. This dashboard provides both sample-level summaries and overall cohort statistics.
Experiment Statistical Details
Analysis completed for 1 sample(s) with 0 flagged sample(s)
Sample Quality Overview
Interactive sample visualization showing quality status. Light squares indicate good samples, red squares indicate samples with statistical outliers or quality issues.
Sample quality can be visualized at a glance
Sample Statistics Summary
Heterozygotes/Homozygotes
Silent/Replacement
Transitions/Transversions
Overall Cohort Statistics
Regional Variant Statistics
3' UTR
5' UTR
exonic
intergenic
intronic
ncRNA
Understanding Your Statistics
Ti/Tv Ratio: Transitions to transversions ratio (expected ~2:1 in human genomes)
Het/Hom Ratio: Heterozygous to homozygous variant ratio
Theta: Watterson's estimator of population genetic diversity
Silent/Replacement: Synonymous to non-synonymous variant ratio
For detailed sample-level statistics and quality warnings, click on individual samples in the visualization above. Need more help? Check out our FAQ section or field descriptions.